BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032A01LP1|AL429491
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig335 825 0.0
3x_Contig1152 363 e-100
>3x_Contig335
Length = 1920
Score = 825 bits (416), Expect = 0.0
Identities = 422/424 (99%)
Strand = Plus / Plus
Query: 1 atccagctaatgatcctgtgattctatatttgaacggtgggcccgggtgttcttcaatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1472 atccagctaatgatcctgtgattctatatttgaacggtgggcccgggtgttcttcaatgg 1531
Query: 61 acaatttgttcttcgaaacggggcctgcttcaattgggcctgatttaaaaccaatccata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1532 acaatttgttcttcgaaacggggcctgcttcaattgggcctgatttaaaaccaatccata 1591
Query: 121 acccatattcatggaataataacgcttccattatattcctagatcagcctgtaaacgtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1592 acccatattcatggaataataacgcttccattatattcctagatcagcctgtaaacgtcg 1651
Query: 181 gattttcgtacagcgaagaaagagttaaaactacaaatgacgctgctagagacgtttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1652 gattttcgtacagcgaagaaagagttaaaactacaaatgacgctgctagagacgtttaca 1711
Query: 241 acttcttggatctattctttaccaaatttcccaacttaaccgcaaacgctttccacatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1712 acttcttggatctattctttaccaaatttcccaacttaaccgcaaacgctttccacatag 1771
Query: 301 ctggagaatcatatgctggtcattacattcctagaattgcccatgaaattgtcagtgttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1772 ctggagaatcatatgctggtcattacattcctagaattgcccatgaaattgtcagtgttc 1831
Query: 361 ataaggatgatacgaagttcaatctttcatcaattgtgataggtaacgggcttacagatc 420
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1832 ataaggatgatacaaagttcaatctttcatcaattgtgataggtaacgggcttacaaatc 1891
Query: 421 catt 424
||||
Sbjct: 1892 catt 1895
>3x_Contig1152
Length = 5366
Score = 363 bits (183), Expect = e-100
Identities = 186/187 (99%)
Strand = Plus / Minus
Query: 693 aagaccttaggatatatccgctcttacttgaaccaagaatttgtgcaagacgctctaggt 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5366 aagaccttaggatatatccgctcttacttgaaccaagaatttgtgcaagacgctctaggt 5307
Query: 753 acgaaagtgagctcgtataacggatgttatacttcagttgggagcgacttcttcctgacg 812
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5306 acgaaagtgagctcgtataacggatgtaatacttcagttgggagcgacttcttcctgacg 5247
Query: 813 ggtgataatagcaggccattccagcaatatgtgaccgaactgcttgatttgaacattcct 872
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5246 ggtgataatagcaggccattccagcaatatgtgaccgaactgcttgatttgaacattcct 5187
Query: 873 gtcttga 879
|||||||
Sbjct: 5186 gtcttga 5180
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5620
Number of Sequences: 1807
Number of extensions: 5620
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 2
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)